If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ), 'gf_id' => 'HOM05D000498', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000498' ), 'data_identifier' => 'HOM05D000498', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000498', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1067', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p04020' => 'bna', 'A02p24820' => 'bna', 'A03p17220' => 'bna', 'A03p17230' => 'bna', 'A03p26040' => 'bna', 'A03p31010' => 'bna', 'A03p31020' => 'bna', 'A04p00540' => 'bna', 'A04p23570' => 'bna', 'A05p00240' => 'bna', 'A05p44000' => 'bna', 'A06p34010' => 'bna', 'A08p37520' => 'bna', 'A09p01970' => 'bna', 'A09p10350' => 'bna', 'A09p68460' => 'bna', 'A10p01570' => 'bna', 'A10p01580' => 'bna', 'A10p01590' => 'bna', 'A10p01600' => 'bna', 'A10p22170' => 'bna', 'Aa31LG10G16610' => 'aar', 'Aa31LG11G12450' => 'aar', 'Aa31LG1G29050' => 'aar', 'Aa31LG1G9620' => 'aar', 'Aa31LG1G9630' => 'aar', 'Aa31LG1G9640' => 'aar', 'Aa31LG5G13660' => 'aar', 'Aa31LG5G2150' => 'aar', 'Aa31LG5G6050' => 'aar', 'Aa31LG9G12380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1576' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_117.4065' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2465' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2852' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2855' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2857' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.1171' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2143' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2144' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2145' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2166' => 'aag', 'Actinidia24326' => 'ach', 'Actinidia29772' => 'ach', 'Actinidia32235' => 'ach', 'Actinidia32509' => 'ach', 'Actinidia35705' => 'ach', 'Ah.06g186040' => 'amhyb', 'Ah.06g186060' => 'amhyb', 'Ah.15g093340' => 'amhyb', 'Ah.15g093350' => 'amhyb', 'Ah.15g093360' => 'amhyb', 'Ah.15g093370' => 'amhyb', 'Ah.15g096740' => 'amhyb', 'AL1G12360' => 'aly', 'AL1G12370' => 'aly', 'AL1G12380' => 'aly', 'AL1G12390' => 'aly', 'AL1G57400' => 'aly', 'AL3G12800' => 'aly', 'AL4G25810' => 'aly', 'AL4G25820' => 'aly', 'AL4G47300' => 'aly', 'AL5G12530' => 'aly', 'AL5G45530' => 'aly', 'AL6G28270' => 'aly', 'AL6G50520' => 'aly', 'Aqoxy1G01564' => 'aox', 'Aqoxy291s001' => 'aox', 'Aqoxy2G01483' => 'aox', 'Aqoxy2G01485' => 'aox', 'Aqoxy2G03014' => 'aox', 'Aqoxy2G03018' => 'aox', 'Aqoxy3G01527' => 'aox', 'Aqoxy3G01528' => 'aox', 'Aqoxy3G02474' => 'aox', 'Aqoxy3G02475' => 'aox', 'Aqoxy3G04168' => 'aox', 'Aqoxy4G00449' => 'aox', 'Aqoxy5G00707' => 'aox', 'Aqoxy6G01909' => 'aox', 'Aqoxy6G02794' => 'aox', 'Aqoxy6G02897' => 'aox', 'Aqoxy6G02898' => 'aox', 'Aqoxy6G02899' => 'aox', 'Aqoxy6G02902_Aqoxy6G02903' => 'aox', 'Aqoxy6G02904' => 'aox', 'Aqoxy6G02905' => 'aox', 'Aqoxy6G02912' => 'aox', 'Aqoxy6G02914' => 'aox', 'Aqoxy7G01975' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06EJ88' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.28J7Y2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.67E0CQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6TET7K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7KA6PT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CRBY30' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F8LB2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M3NNG8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NH9VWV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QHGU6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SN486S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7ZTHA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YH7NAD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z67LQN' => 'arhy', 'AT1G02920' => 'ath', 'AT1G02930' => 'ath', 'AT1G02940' => 'ath', 'AT1G02950' => 'ath', 'AT1G49860' => 'ath', 'AT2G02930' => 'ath', 'AT2G30860' => 'ath', 'AT2G30870' => 'ath', 'AT2G47730' => 'ath', 'AT3G03190' => 'ath', 'AT3G62760' => 'ath', 'AT4G02520' => 'ath', 'AT5G17220' => 'ath', 'ATR0661G221' => 'atr', 'ATR0706G041' => 'atr', 'ATR0706G078' => 'atr', 'ATR0706G123' => 'atr', 'ATR0706G216' => 'atr', 'ATR0706G249' => 'atr', 'ATR0706G263' => 'atr', 'ATR0763G109' => 'atr', 'Atru.chr1.2112' => 'acertr', 'Atru.chr13.202' => 'acertr', 'Atru.chr2.61' => 'acertr', 'Atru.chr4.2816' => 'acertr', 'Atru.chr5.1205' => 'acertr', 'Atru.chr5.1213' => 'acertr', 'Atru.chr5.1214' => 'acertr', 'Atru.chr5.1215' => 'acertr', 'Atru.chr6.2040' => 'acertr', 'Atru.chr6.2041' => 'acertr', 'AUR62008598' => 'cqu', 'AUR62008599' => 'cqu', 'AUR62008600' => 'cqu', 'AUR62008602' => 'cqu', 'AUR62008604' => 'cqu', 'AUR62008607' => 'cqu', 'AUR62008608' => 'cqu', 'AUR62008609' => 'cqu', 'AUR62008610' => 'cqu', 'AUR62008630' => 'cqu', 'AUR62013858' => 'cqu', 'AUR62026020' => 'cqu', 'AUR62033158' => 'cqu', 'AUR62033160' => 'cqu', 'AUR62033161' => 'cqu', 'AUR62033162' => 'cqu', 'AUR62033163' => 'cqu', 'AUR62033175' => 'cqu', 'AUR62033176' => 'cqu', 'AUR62033177' => 'cqu', 'AUR62033178' => 'cqu', 'AUR62033179' => 'cqu', 'AUR62033180' => 'cqu', 'AUR62044279' => 'cqu', 'BcaB01g02032' => 'bca', 'BcaB01g02033' => 'bca', 'BcaB01g02464' => 'bca', 'BcaB01g02465' => 'bca', 'BcaB01g02466' => 'bca', 'BcaB01g02471' => 'bca', 'BcaB01g02519' => 'bca', 'BcaB01g03161' => 'bca', 'BcaB01g04077' => 'bca', 'BcaB01g04078' => 'bca', 'BcaB02g08100' => 'bca', 'BcaB02g08750' => 'bca', 'BcaB03g15747' => 'bca', 'BcaB03g15748' => 'bca', 'BcaB03g15749' => 'bca', 'BcaB03g15750' => 'bca', 'BcaB04g17290' => 'bca', 'BcaB05g23638' => 'bca', 'BcaB06g26238' => 'bca', 'BcaB06g28389' => 'bca', 'BcaB06g28455' => 'bca', 'BcaB08g34726' => 'bca', 'BcaB08g34729' => 'bca', 'BcaB08g36797' => 'bca', 'BcaC01g02920' => 'bca', 'BcaC01g02925' => 'bca', 'BcaC01g05024' => 'bca', 'BcaC01g06016' => 'bca', 'BcaC01g06017' => 'bca', 'BcaC01g06750' => 'bca', 'BcaC01g06751' => 'bca', 'BcaC02g10310' => 'bca', 'BcaC02g12546' => 'bca', 'BcaC03g16141' => 'bca', 'BcaC03g18540' => 'bca', 'BcaC04g18819' => 'bca', 'BcaC05g24576' => 'bca', 'BcaC05g24577' => 'bca', 'BcaC05g24578' => 'bca', 'BcaC05g30527' => 'bca', 'BcaC07g36982' => 'bca', 'BcaC07g42296' => 'bca', 'BcaC07g42413' => 'bca', 'BcaNung00412' => 'bca', 'BcaNung04063' => 'bca', 'BcaNung05519' => 'bca', 'BolC2t06795H' => 'bol', 'BolC2t09943H' => 'bol', 'BolC3t14411H' => 'bol', 'BolC3t14412H' => 'bol', 'BolC3t15453H' => 'bol', 'BolC3t16069H' => 'bol', 'BolC3t16070H' => 'bol', 'BolC3t18096H' => 'bol', 'BolC4t21662H' => 'bol', 'BolC4t24580H' => 'bol', 'BolC4t27502H' => 'bol', 'BolC5t28936H' => 'bol', 'BolC5t28937H' => 'bol', 'BolC5t28938H' => 'bol', 'BolC5t32427H' => 'bol', 'BolC5t35031H' => 'bol', 'BolC8t46835H' => 'bol', 'BolC8t52822H' => 'bol', 'BolC9t53136H' => 'bol', 'BolC9t53137H' => 'bol', 'BolC9t58832H' => 'bol', 'BraA02t05365Z' => 'bra', 'BraA02t07470Z' => 'bra', 'BraA03t10995Z' => 'bra', 'BraA03t10996Z' => 'bra', 'BraA03t11819Z' => 'bra', 'BraA03t12277Z' => 'bra', 'BraA03t12278Z' => 'bra', 'BraA04t15774Z' => 'bra', 'BraA04t17883Z' => 'bra', 'BraA05t19020Z' => 'bra', 'BraA06t26335Z' => 'bra', 'BraA08t35649Z' => 'bra', 'BraA09t35847Z' => 'bra', 'BraA09t35848Z' => 'bra', 'BraA09t36679Z' => 'bra', 'BraA09t42189Z' => 'bra', 'BraA10t42433Z' => 'bra', 'BraA10t42434Z' => 'bra', 'BraA10t42435Z' => 'bra', 'BraA10t42436Z' => 'bra', 'BraA10t44276Z' => 'bra', 'BraSC90t46710Z' => 'bra', 'C02p08840' => 'bna', 'C02p08860' => 'bna', 'C02p39330' => 'bna', 'C03p20330' => 'bna', 'C03p20340' => 'bna', 'C03p31030' => 'bna', 'C03p37790' => 'bna', 'C03p37810' => 'bna', 'C03p58330' => 'bna', 'C03p58370' => 'bna', 'C04p00150' => 'bna', 'C04p30450' => 'bna', 'C04p60000' => 'bna', 'C05p01570' => 'bna', 'C05p01580' => 'bna', 'C05p01590' => 'bna', 'C05p63620' => 'bna', 'C08p00340' => 'bna', 'C08p03690' => 'bna', 'C08p03700' => 'bna', 'C08p53080' => 'bna', 'C09p02060' => 'bna', 'C09p02070' => 'bna', 'C09p59960' => 'bna', 'CAN.G1006.9' => 'can', 'CAN.G1681.18' => 'can', 'CAN.G339.40' => 'can', 'CAN.G401.15' => 'can', 'CANSAT25G0290' => 'cansat', 'CANSAT25G0651' => 'cansat', 'CANSAT25G1007' => 'cansat', 'CANSAT25G1533' => 'cansat', 'CANSAT25G2187' => 'cansat', 'CANSAT25G2484' => 'cansat', 'CANSAT25G2832' => 'cansat', 'CANSAT25G3226' => 'cansat', 'CANSAT25G3799' => 'cansat', 'CANSAT64G2745' => 'cansat', 'CARHR002270' => 'chi', 'CARHR002280' => 'chi', 'CARHR039910' => 'chi', 'CARHR077210' => 'chi', 'CARHR124340' => 'chi', 'CARHR124350' => 'chi', 'CARHR143110' => 'chi', 'CARHR195990' => 'chi', 'CARHR250820' => 'chi', 'Carub.0001s0205' => 'cru', 'Carub.0001s0206' => 'cru', 'Carub.0001s0207' => 'cru', 'Carub.0001s0208' => 'cru', 'Carub.0001s3417' => 'cru', 'Carub.0001s3907' => 'cru', 'Carub.0003s0234' => 'cru', 'Carub.0004s1206' => 'cru', 'Carub.0004s1207' => 'cru', 'Carub.0004s3045' => 'cru', 'Carub.0006s1541' => 'cru', 'Carub.0006s3461' => 'cru', 'Ca_06259_v3' => 'car', 'Ca_06260_v3' => 'car', 'Ca_10355_v3' => 'car', 'Ca_10356_v3' => 'car', 'Ca_13487_v3' => 'car', 'Ca_14587_v3' => 'car', 'Ca_17073_v3' => 'car', 'CBR_g16143' => 'cbr', 'CBR_g16149' => 'cbr', 'CBR_g49662' => 'cbr', 'Cc00_g26170' => 'ccan', 'Cc01_g20580' => 'ccan', 'Cc10_g01040' => 'ccan', 'CDE02G1578' => 'cde', 'CDE05G0027' => 'cde', 'CDE05G0839' => 'cde', 'CDE08G0650' => 'cde', 'CDE08G0957' => 'cde', 'CDE09G1124' => 'cde', 'Cfa005962' => 'cfa', 'Cfa005964' => 'cfa', 'Cfa005967' => 'cfa', 'Cfa005968' => 'cfa', 'Cfa005969' => 'cfa', 'Cfa005971' => 'cfa', 'Cfa005972' => 'cfa', 'Cfa005973' => 'cfa', 'Cfa007752' => 'cfa', 'Cfa014018' => 'cfa', 'Cfa026773' => 'cfa', 'Ciclev10002119m.g' => 'ccl', 'Ciclev10012739m.g' => 'ccl', 'Ciclev10022160m.g' => 'ccl', 'Ciclev10022212m.g' => 'ccl', 'Ciclev10024356m.g' => 'ccl', 'Ciclev10032737m.g' => 'ccl', 'Ciclev10032743m.g' => 'ccl', 'Ciclev10033001m.g' => 'ccl', 'CiPaw.04G049300' => 'cil', 'CiPaw.07G104300' => 'cil', 'CiPaw.07G104900' => 'cil', 'CiPaw.07G105000' => 'cil', 'CiPaw.07G105200' => 'cil', 'CiPaw.07G105300' => 'cil', 'CiPaw.07G105400' => 'cil', 'CiPaw.07G142600' => 'cil', 'CiPaw.08G069800' => 'cil', 'CiPaw.08G097900' => 'cil', 'ClCG08G013970' => 'cla', 'ClCG09G006110' => 'cla', 'ClCG09G006120' => 'cla', 'ClCG09G006130' => 'cla', 'COL.COLO4_02840' => 'col', 'COL.COLO4_13889' => 'col', 'COL.COLO4_20624' => 'col', 'COL.COLO4_23394' => 'col', 'COL.COLO4_23395' => 'col', 'COL.COLO4_23396' => 'col', 'COL.COLO4_38389' => 'col', 'Cpa.g.sc1612.1' => 'cpa', 'Cpa.g.sc26.249' => 'cpa', 'Cpa.g.sc50.116' => 'cpa', 'Cpa.g.sc9.200' => 'cpa', 'Cpa.g.sc9.201' => 'cpa', 'Cre13.g584850' => 'cre', 'Cre15.g636750' => 'cre', 'Cre15.g636800' => 'cre', 'CsaV3_2G024500' => 'csa', 'CsaV3_7G029040' => 'csa', 'CsaV3_7G029050' => 'csa', 'CsaV3_7G029060' => 'csa', 'CSS0003128' => 'camsi', 'CSS0004056' => 'camsi', 'CSS0005789' => 'camsi', 'CSS0007762' => 'camsi', 'CSS0008040' => 'camsi', 'CSS0008199' => 'camsi', 'CSS0013237' => 'camsi', 'CSS0018634' => 'camsi', 'CSS0018682' => 'camsi', 'CSS0022086' => 'camsi', 'CSS0022141' => 'camsi', 'CSS0023223' => 'camsi', 'CSS0026690' => 'camsi', 'CSS0027599' => 'camsi', 'CSS0031248' => 'camsi', 'CSS0044356' => 'camsi', 'CSS0049526' => 'camsi', 'DCAR_003401' => 'dca', 'DCAR_018341' => 'dca', 'Dinv19084' => 'din', 'Dinv19724' => 'din', 'Dinv19726' => 'din', 'Dinv19727' => 'din', 'Dinv31904' => 'din', 'Dinv33028' => 'din', 'Duzib047G0002' => 'dzi', 'Duzib116G0842' => 'dzi', 'Duzib138G0415' => 'dzi', 'Duzib138G0573' => 'dzi', 'Duzib138G1686' => 'dzi', 'Duzib138G1769' => 'dzi', 'Duzib138G1889' => 'dzi', 'Duzib211G0007' => 'dzi', 'Duzib211G0701' => 'dzi', 'Duzib212G0255' => 'dzi', 'ECA236G3799' => 'eca', 'ECA236G4588' => 'eca', 'ECA248G0649' => 'eca', 'ECA248G2235' => 'eca', 'EL10Ac1g02059' => 'bvu', 'EL10Ac3g07065' => 'bvu', 'EL10Ac3g07066' => 'bvu', 'EL10Ac7g16600' => 'bvu', 'EL10Ac7g17486' => 'bvu', 'EL10Ac8g19234' => 'bvu', 'EL10Ac9g22655' => 'bvu', 'EL10As6g23643' => 'bvu', 'Eucgr.F02915' => 'egr', 'Eucgr.F03703' => 'egr', 'Eucgr.H01166' => 'egr', 'Eucgr.H01167' => 'egr', 'Eucgr.H01169' => 'egr', 'Eucgr.H01172' => 'egr', 'Eucgr.H01173' => 'egr', 'Eucgr.H01174' => 'egr', 'Eucgr.H01175' => 'egr', 'Eucgr.H01176' => 'egr', 'Eucgr.H01183' => 'egr', 'Eucgr.K01229' => 'egr', 'Eucgr.K01230' => 'egr', 'Eucgr.K01231' => 'egr', 'Eucgr.K01232' => 'egr', 'Eucgr.K01233' => 'egr', 'Eucgr.K01234' => 'egr', 'Eucgr.K01236' => 'egr', 'Eucgr.K01237' => 'egr', 'Eucgr.K03456' => 'egr', 'Eucgr.K03509' => 'egr', 'Eucgr.L01827' => 'egr', 'Eucgr.L02535' => 'egr', 'FAN02G3190' => 'fan', 'FAN04G1473' => 'fan', 'FAN05G1527' => 'fan', 'FAN08G2360' => 'fan', 'FAN09G1486' => 'fan', 'FAN09G2564' => 'fan', 'FAN13G2778' => 'fan', 'FAN13G3117' => 'fan', 'FAN14G1005' => 'fan', 'FAN15G2562' => 'fan', 'FAN15G3136' => 'fan', 'FAN18G2595' => 'fan', 'FAN19G2184' => 'fan', 'FAN20G1051' => 'fan', 'FAN24G0080' => 'fan', 'FAN24G3004' => 'fan', 'FAN26G0532' => 'fan', 'FAN27G1143' => 'fan', 'FAN28G2583' => 'fan', 'FvH4_1g27460' => 'fve', 'FvH4_2g25180' => 'fve', 'FvH4_2g25210' => 'fve', 'FvH4_2g25220' => 'fve', 'FvH4_5g24660' => 'fve', 'FvH4_6g38760' => 'fve', 'Glyma.02G154300' => 'gma', 'Glyma.02G154400' => 'gma', 'Glyma.02G283900' => 'gma', 'Glyma.08G306800' => 'gma', 'Glyma.08G306900' => 'gma', 'Glyma.10G019900' => 'gma', 'Glyma.11G212900' => 'gma', 'Glyma.14G031000' => 'gma', 'Glyma.18G043700' => 'gma', 'Glyma.18G111100' => 'gma', 'Glyma.18G111200' => 'gma', 'Glyma.18G111301' => 'gma', 'Gohir.A07G074300' => 'ghi', 'Gohir.A08G117500' => 'ghi', 'Gohir.A11G115700' => 'ghi', 'Gohir.A11G157300' => 'ghi', 'Gohir.A11G200248' => 'ghi', 'Gohir.A12G010100' => 'ghi', 'Gohir.D01G170400' => 'ghi', 'Gohir.D02G110901' => 'ghi', 'Gohir.D05G276250' => 'ghi', 'Gohir.D06G082100' => 'ghi', 'Gohir.D07G079000' => 'ghi', 'Gohir.D08G125833' => 'ghi', 'Gohir.D08G138300' => 'ghi', 'Gohir.D10G184701' => 'ghi', 'Gohir.D10G188651' => 'ghi', 'Gohir.D11G120600' => 'ghi', 'Gohir.D11G164300' => 'ghi', 'Gohir.D11G222600' => 'ghi', 'Gohir.D11G336501' => 'ghi', 'Gohir.D12G010200' => 'ghi', 'Gohir.D13G137000' => 'ghi', 'Gorai.001G083600' => 'gra', 'Gorai.004G141800' => 'gra', 'Gorai.004G141900' => 'gra', 'Gorai.005G125800' => 'gra', 'Gorai.007G129400' => 'gra', 'Gorai.007G175100' => 'gra', 'Gorai.007G240200' => 'gra', 'Gorai.008G010200' => 'gra', 'Gorai.008G063900' => 'gra', 'Gorai.009G042300' => 'gra', 'Gorai.010G095500' => 'gra', 'Gorai.011G207100' => 'gra', 'Gorai.011G211600' => 'gra', 'Gorai.013G153600' => 'gra', 'GSVIVG01008725001' => 'vvi', 'GSVIVG01010939001' => 'vvi', 'GSVIVG01010940001' => 'vvi', 'GSVIVG01010942001' => 'vvi', 'GSVIVG01020831001' => 'vvi', 'GSVIVG01020832001' => 'vvi', 'GSVIVG01027958001' => 'vvi', 'GSVIVG01027961001' => 'vvi', 'GSVIVG01035256001' => 'vvi', 'GSVIVG01035262001' => 'vvi', 'GSVIVG01035266001' => 'vvi', 'HanXRQChr01g0001711' => 'han', 'HanXRQChr01g0001721' => 'han', 'HanXRQChr01g0001731' => 'han', 'HanXRQChr01g0015391' => 'han', 'HanXRQChr04g0118071' => 'han', 'HanXRQChr04g0118081' => 'han', 'HanXRQChr04g0118091' => 'han', 'HanXRQChr04g0118201' => 'han', 'HanXRQChr04g0118211' => 'han', 'HanXRQChr04g0118231' => 'han', 'HanXRQChr05g0145711' => 'han', 'HanXRQChr06g0163911' => 'han', 'HanXRQChr15g0480091' => 'han', 'Haze_01220' => 'cav', 'Haze_04874' => 'cav', 'Haze_04878' => 'cav', 'Haze_04879' => 'cav', 'Haze_04880' => 'cav', 'Haze_04881' => 'cav', 'Haze_14320' => 'cav', 'Haze_22725' => 'cav', 'Hma1.2p1_0158F.1_g069560' => 'hma', 'Hma1.2p1_0209F.1_g088720' => 'hma', 'Hma1.2p1_0402F.1_g145100' => 'hma', 'Hma1.2p1_0491F.1_g164390' => 'hma', 'Hma1.2p1_0491F.1_g164400' => 'hma', 'Hma1.2p1_2322F.1_g319890' => 'hma', 'Hma1.2p1_2849F.1_g329375' => 'hma', 'HPP92_002141' => 'vpl', 'HPP92_003490' => 'vpl', 'HPP92_008336' => 'vpl', 'HPP92_008337' => 'vpl', 'HPP92_014546' => 'vpl', 'HPP92_014999' => 'vpl', 'HPP92_016934' => 'vpl', 'HPP92_026888' => 'vpl', 'HPP92_028728' => 'vpl', 'Hund05145' => 'sun', 'Hund05146' => 'sun', 'Hund05407' => 'sun', 'Hund05408' => 'sun', 'Hund05409' => 'sun', 'Lalb_Chr01g0008471' => 'lal', 'Lalb_Chr07g0189051' => 'lal', 'Lalb_Chr07g0189061' => 'lal', 'Lalb_Chr07g0189071' => 'lal', 'Lalb_Chr10g0106531' => 'lal', 'Lalb_Chr10g0106541' => 'lal', 'Lalb_Chr12g0208731' => 'lal', 'Lalb_Chr12g0208741' => 'lal', 'Lalb_Chr15g0081631' => 'lal', 'Lalb_Chr15g0085181' => 'lal', 'Lj1A33T89' => 'lonja', 'Lj1A33T90' => 'lonja', 'Lj1C33T10' => 'lonja', 'Lj2A1190T60' => 'lonja', 'Lj2A511T40' => 'lonja', 'Lj4A802T108' => 'lonja', 'Lj4C16T24' => 'lonja', 'Lj4C802T15' => 'lonja', 'Lj5g0003569' => 'lja', 'Lj5g0005601' => 'lja', 'Lj5g0013739' => 'lja', 'Lj5g0026672' => 'lja', 'Lj6g0011143' => 'lja', 'Lj6g0011173' => 'lja', 'Lj6g0015309' => 'lja', 'Lj6g0021629' => 'lja', 'Lj6g0027789' => 'lja', 'Lj8A97T47' => 'lonja', 'LjContig00049g0007619' => 'lja', 'Lsat_1_v5_gn_3_87760' => 'lsa', 'Lsat_1_v5_gn_5_191321' => 'lsa', 'Lsat_1_v5_gn_7_30140' => 'lsa', 'Lsat_1_v5_gn_8_54660' => 'lsa', 'Lsat_1_v5_gn_9_46740' => 'lsa', 'Manes.01G130900' => 'mes', 'Manes.01G216200' => 'mes', 'Manes.02G081800' => 'mes', 'Manes.02G089100' => 'mes', 'Manes.02G089200' => 'mes', 'Manes.02G143300' => 'mes', 'Manes.05G064800' => 'mes', 'Manes.18G008600' => 'mes', 'Mapoly0002s0202' => 'mpo', 'Mapoly0003s0168' => 'mpo', 'Mapoly0009s0025' => 'mpo', 'Mapoly0031s0078' => 'mpo', 'Mapoly0046s0045' => 'mpo', 'Mapoly0075s0030' => 'mpo', 'Mapoly0075s0031' => 'mpo', 'Mapoly0078s0033' => 'mpo', 'Mapoly0141s0017' => 'mpo', 'Mapoly0177s0013' => 'mpo', 'Mapoly0185s0005' => 'mpo', 'Mapoly0193s0023' => 'mpo', 'Mapoly0524s0002' => 'mpo', 'Mapoly0818s0001' => 'mpo', 'Mapoly1812s0001' => 'mpo', 'MBI01_g18817_MAGBIO' => 'mbi', 'MBI01_g36035_MAGBIO' => 'mbi', 'MBI06_g13412_MAGBIO' => 'mbi', 'MBI15_g06109_MAGBIO' => 'mbi', 'MBI18_g14079_MAGBIO' => 'mbi', 'MBI18_g14080_MAGBIO' => 'mbi', 'MBI19_g18873_MAGBIO' => 'mbi', 'MBI19_g24334_MAGBIO' => 'mbi', 'MBI19_g24335_MAGBIO' => 'mbi', 'MBI19_g41248_MAGBIO' => 'mbi', 'MBI19_g44804_MAGBIO' => 'mbi', 'MBI19_g44809_MAGBIO' => 'mbi', 'MD03G1282700' => 'mdo', 'MD03G1282800' => 'mdo', 'MD03G1282900' => 'mdo', 'MD03G1283000' => 'mdo', 'MD06G1012200' => 'mdo', 'MD08G1006600' => 'mdo', 'MD09G1147000' => 'mdo', 'MD09G1147100' => 'mdo', 'MD09G1147300' => 'mdo', 'MD09G1147400' => 'mdo', 'MD11G1303600' => 'mdo', 'MD17G1133600' => 'mdo', 'MD17G1133700' => 'mdo', 'MD17G1133800' => 'mdo', 'MD17G1134200' => 'mdo', 'MD17G1134300' => 'mdo', 'MD17G1272100' => 'mdo', 'Medtr1g026140' => 'mtr', 'Medtr1g088825' => 'mtr', 'Medtr1g088840' => 'mtr', 'Medtr1g088845' => 'mtr', 'Medtr1g088850' => 'mtr', 'Medtr1g492670' => 'mtr', 'Medtr3g064700' => 'mtr', 'Medtr3g450790' => 'mtr', 'Medtr3g450930' => 'mtr', 'Medtr5g090910' => 'mtr', 'Medtr5g090920' => 'mtr', 'MELO3C011334.2' => 'cme', 'MELO3C016031.2' => 'cme', 'MELO3C016032.2' => 'cme', 'MELO3C016033.2' => 'cme', 'MELO3C016034.2' => 'cme', 'Migut.C00231' => 'egut', 'Migut.C00458' => 'egut', 'Migut.D00189' => 'egut', 'Migut.D00190' => 'egut', 'Migut.D00191' => 'egut', 'Migut.K00978' => 'egut', 'MSTRG.12602' => 'ama', 'MSTRG.18173' => 'ama', 'MSTRG.18174' => 'ama', 'MSTRG.21617' => 'ama', 'MSTRG.24963' => 'ama', 'MSTRG.3669' => 'ama', 'Nitab4.5_0000483g0230' => 'nta', 'Nitab4.5_0000498g0140' => 'nta', 'Nitab4.5_0002353g0040' => 'nta', 'Nitab4.5_0002470g0030' => 'nta', 'Nitab4.5_0003412g0070' => 'nta', 'Nitab4.5_0005474g0060' => 'nta', 'Nitab4.5_0007004g0010' => 'nta', 'Nitab4.5_0010451g0030' => 'nta', 'Nitab4.5_0011583g0010' => 'nta', 'Nitab4.5_0012359g0020' => 'nta', 'Nn1g01672' => 'nnu', 'Nn3g21415' => 'nnu', 'Nn3g21416' => 'nnu', 'Nn4g23103' => 'nnu', 'Nn4g24774' => 'nnu', 'Nn4g25893' => 'nnu', 'Nn4g25894' => 'nnu', 'Nn5g30864' => 'nnu', 'Nn7g38007' => 'nnu', 'Oeu003034.1' => 'oeu', 'Oeu003038.1' => 'oeu', 'Oeu003041.1' => 'oeu', 'Oeu011437.1' => 'oeu', 'Oeu012517.1' => 'oeu', 'Oeu026116.1' => 'oeu', 'Oeu046695.1' => 'oeu', 'Oeu046696.1' => 'oeu', 'Oeu046697.1' => 'oeu', 'Oeu057380.1' => 'oeu', 'Oeu057387.1' => 'oeu', 'Os01g0353400' => 'osa', 'Os01g0369700' => 'osa', 'Os01g0370200' => 'osa', 'Os01g0370600' => 'osa', 'Os01g0370900' => 'osa', 'Os01g0371200' => 'osa', 'Os01g0371400' => 'osa', 'Os01g0371500' => 'osa', 'Os01g0372400' => 'osa', 'Os01g0374000' => 'osa', 'Os01g0764000' => 'osa', 'Os01g0933900' => 'osa', 'Os03g0134900' => 'osa', 'Os03g0135100' => 'osa', 'Os03g0135200' => 'osa', 'Os03g0135300' => 'osa', 'Os05g0148900' => 'osa', 'Os09g0544400' => 'osa', 'Os10g0543800' => 'osa', 'Peaxi162Scf00064g00827' => 'pax', 'Peaxi162Scf00067g02427' => 'pax', 'Peaxi162Scf00067g02428' => 'pax', 'Peaxi162Scf00399g00097' => 'pax', 'Peaxi162Scf00399g00920' => 'pax', 'Peaxi162Scf00399g00924' => 'pax', 'Peaxi162Scf00713g00038' => 'pax', 'PGR004G2747' => 'pgr', 'PGR031G1562' => 'pgr', 'PGR031G3569' => 'pgr', 'PGR044G1019' => 'pgr', 'PGR044G1084' => 'pgr', 'PGR044G1185' => 'pgr', 'PGR090G0001' => 'pgr', 'PGR090G0003' => 'pgr', 'PGR119G0883' => 'pgr', 'PGR119G1473' => 'pgr', 'PGR119G2171' => 'pgr', 'PGSC0003DMG400014627' => 'stu', 'PGSC0003DMG400016722' => 'stu', 'PGSC0003DMG400029416' => 'stu', 'PGSC0003DMG402011367' => 'stu', 'Phvul.001G002000' => 'pvu', 'Phvul.006G020800' => 'pvu', 'Phvul.006G022600' => 'pvu', 'Phvul.006G023400' => 'pvu', 'Phvul.006G023500' => 'pvu', 'Phvul.006G087500' => 'pvu', 'Phvul.007G107200' => 'pvu', 'Phvul.007G164900' => 'pvu', 'Phvul.008G195400' => 'pvu', 'Phvul.008G195500' => 'pvu', 'Phvul.008G195600' => 'pvu', 'Phvul.009G105900' => 'pvu', 'Potri.002G015100' => 'ptr', 'Potri.002G015200' => 'ptr', 'Potri.002G207093' => 'ptr', 'Potri.002G207286' => 'ptr', 'Potri.002G207479' => 'ptr', 'Potri.002G207672' => 'ptr', 'Potri.014G132200' => 'ptr', 'Potri.017G138800' => 'ptr', 'Pp3c12_16890' => 'ppa', 'Pp3c12_24820' => 'ppa', 'Pp3c15_23900' => 'ppa', 'Pp3c15_5310' => 'ppa', 'Pp3c17_5790' => 'ppa', 'Pp3c17_6080' => 'ppa', 'Pp3c17_6090' => 'ppa', 'Pp3c23_20550' => 'ppa', 'Pp3c3_31590' => 'ppa', 'Pp3c7_13080' => 'ppa', 'Pp3c7_13090' => 'ppa', 'PRCOL_00004381' => 'pco', 'Prupe.1G358500' => 'ppe', 'Prupe.3G013600' => 'ppe', 'Prupe.3G178100' => 'ppe', 'Prupe.3G178200' => 'ppe', 'Prupe.3G178300' => 'ppe', 'Prupe.5G014900' => 'ppe', 'Prupe.8G256600' => 'ppe', 'Prupe.8G256900' => 'ppe', 'Prupe.8G260300' => 'ppe', 'Psat2g017360' => 'psa', 'Psat5g142280' => 'psa', 'Psat5g193560' => 'psa', 'Psat5g198360' => 'psa', 'Psat5g198400' => 'psa', 'Psat6g000880' => 'psa', 'Psat6g166800' => 'psa', 'PSO017G3376' => 'pso', 'PSO063G2862' => 'pso', 'PSO081G0101' => 'pso', 'PSO170G0251' => 'pso', 'PSO170G0770' => 'pso', 'PSO170G3357' => 'pso', 'PSO170G4781' => 'pso', 'PSO210G2950' => 'pso', 'PSO210G3756' => 'pso', 'PSO210G6326' => 'pso', 'PSO229G0102' => 'pso', 'PSO357G0275' => 'pso', 'PSO357G0554' => 'pso', 'PSO381G0002' => 'pso', 'PSO407G0138' => 'pso', 'PSO407G0329' => 'pso', 'PSO421G0245' => 'pso', 'PSO478G1806' => 'pso', 'PSO541G0972' => 'pso', 'PSO541G1250' => 'pso', 'PSO541G2376' => 'pso', 'PSO541G4085' => 'pso', 'PSO541G4986' => 'pso', 'PSO541G5640' => 'pso', 'PSO675G0304' => 'pso', 'PSO675G0485' => 'pso', 'PSO675G2761' => 'pso', 'PSO675G3313' => 'pso', 'PSO675G6494' => 'pso', 'PSO675G6672' => 'pso', 'PSO782G4729' => 'pso', 'PSO832G1042' => 'pso', 'QL02p013229' => 'qlo', 'QL02p064164' => 'qlo', 'QL06p008678' => 'qlo', 'QL11p008714' => 'qlo', 'QL12p026754' => 'qlo', 'QL12p026766' => 'qlo', 'QL12p026783' => 'qlo', 'QL12p026785' => 'qlo', 'QL12p026786' => 'qlo', 'QL12p026802' => 'qlo', 'QL12p026808' => 'qlo', 'QL12p026833' => 'qlo', 'QL12p026879' => 'qlo', 'QL12p026894' => 'qlo', 'QL12p026899' => 'qlo', 'QL12p026931' => 'qlo', 'QL12p026939' => 'qlo', 'QL12p026955' => 'qlo', 'QL12p026960' => 'qlo', 'RcHm_v2.0_Chr2g0152311' => 'rch', 'RcHm_v2.0_Chr3g0488551' => 'rch', 'RcHm_v2.0_Chr6g0293301' => 'rch', 'RcHm_v2.0_Chr6g0293321' => 'rch', 'RcHm_v2.0_Chr6g0293331' => 'rch', 'RcHm_v2.0_Chr6g0293341' => 'rch', 'RcHm_v2.0_Chr6g0303771' => 'rch', 'RcHm_v2.0_Chr7g0215041' => 'rch', 'Rhsim07G0251700' => 'rsi', 'Rhsim08G0022000' => 'rsi', 'Rhsim12G0012900' => 'rsi', 'Rhsim13G0013300' => 'rsi', 'Rhsim13G0013400' => 'rsi', 'Rhsim13G0013500' => 'rsi', 'Rhsim13G0013600' => 'rsi', 'Rhsim13G0013700' => 'rsi', 'Rhsim13G0014000' => 'rsi', 'Rhsim13G0014100' => 'rsi', 'Rhsim13G0014200' => 'rsi', 'Sabra01G0161500' => 'sbr', 'Sabra02G0012100' => 'sbr', 'Sabra02G0151500' => 'sbr', 'Sabra02G0152100' => 'sbr', 'Sabra02G0152400' => 'sbr', 'Sabra02G0152500' => 'sbr', 'Sabra02G0152600' => 'sbr', 'Sabra14G0098400' => 'sbr', 'Sabra14G0098500' => 'sbr', 'Sabra17G0113300' => 'sbr', 'Sabra17G0116700' => 'sbr', 'SalBow3G1413' => 'sbo', 'SalBow3G4098' => 'sbo', 'SalBow3G4345' => 'sbo', 'SalBow7G2178' => 'sbo', 'Sc05g0004280' => 'sci', 'Sc15g0003570' => 'sci', 'Sc15g0003600' => 'sci', 'Sc17g0003250' => 'sci', 'Sc17g0003300' => 'sci', 'Sc24g0003860' => 'sci', 'Sed0007616' => 'sed', 'Sed0007771' => 'sed', 'Sed0016367' => 'sed', 'Sed0024229' => 'sed', 'Sed0024825' => 'sed', 'Sed0028013' => 'sed', 'SEGI_00450' => 'sgi', 'SEGI_00764' => 'sgi', 'SEGI_01610' => 'sgi', 'SEGI_01792' => 'sgi', 'SEGI_02219' => 'sgi', 'SEGI_02250' => 'sgi', 'SEGI_02556' => 'sgi', 'SEGI_03588' => 'sgi', 'SEGI_04326' => 'sgi', 'SEGI_05352' => 'sgi', 'SEGI_05437' => 'sgi', 'SEGI_07188' => 'sgi', 'SEGI_08400' => 'sgi', 'SEGI_12908' => 'sgi', 'SEGI_13669' => 'sgi', 'SEGI_14016' => 'sgi', 'SEGI_18111' => 'sgi', 'SEGI_18372' => 'sgi', 'SEGI_21782' => 'sgi', 'SEGI_23013' => 'sgi', 'SEGI_23518' => 'sgi', 'SEGI_25009' => 'sgi', 'SEGI_26328' => 'sgi', 'SEGI_27004' => 'sgi', 'SEGI_27645' => 'sgi', 'SEGI_31252' => 'sgi', 'SEGI_31289' => 'sgi', 'SEGI_33087' => 'sgi', 'SEGI_33230' => 'sgi', 'SEGI_33309' => 'sgi', 'SEGI_36611' => 'sgi', 'SEGI_37270' => 'sgi', 'SEGI_37842' => 'sgi', 'SEGI_38651' => 'sgi', 'SEGI_39078' => 'sgi', 'SEGI_40435' => 'sgi', 'SEGI_40567' => 'sgi', 'SGA_v2.0_scaffold115G32041' => 'sas', 'SGA_v2.0_scaffold145G36107' => 'sas', 'SGA_v2.0_scaffold1G00384' => 'sas', 'SGA_v2.0_scaffold1G00385' => 'sas', 'SGA_v2.0_scaffold2G01408' => 'sas', 'SGA_v2.0_scaffold2G01412' => 'sas', 'SGA_v2.0_scaffold44G16862' => 'sas', 'SMO356G0227' => 'smo', 'Solyc02g081340.3' => 'sly', 'Solyc06g009020.2' => 'sly', 'Solyc06g009040.4' => 'sly', 'Solyc09g074850.4' => 'sly', 'Solyc12g094430.1' => 'sly', 'Sopen02g025970' => 'spe', 'Sopen06g003820' => 'spe', 'Sopen06g003840' => 'spe', 'Sopen12g031310' => 'spe', 'Sp1g01920' => 'spa', 'Sp1g01930' => 'spa', 'Sp1g01940' => 'spa', 'Sp3g02230' => 'spa', 'Sp4g13320' => 'spa', 'Sp4g13340' => 'spa', 'Sp4g29660' => 'spa', 'Sp5g00760' => 'spa', 'Sp6g02430' => 'spa', 'Sp6g02440' => 'spa', 'Sp6g27010' => 'spa', 'SpUN0996_0010' => 'spa', 'TAR112G0002' => 'tar', 'TAR365G0171' => 'tar', 'TAR365G0627' => 'tar', 'TAR365G0966' => 'tar', 'TAR567G0001' => 'tar', 'TAR625G0594' => 'tar', 'TAR626G0992' => 'tar', 'TAR633G0857' => 'tar', 'TAR636G0415' => 'tar', 'THA.LOC104798837' => 'tha', 'THA.LOC104800004' => 'tha', 'THA.LOC104801261' => 'tha', 'THA.LOC104801262' => 'tha', 'THA.LOC104801263' => 'tha', 'THA.LOC104815837' => 'tha', 'THA.LOC104815933' => 'tha', 'THA.LOC104817504' => 'tha', 'THA.LOC104817505' => 'tha', 'THA.LOC104820867' => 'tha', 'THA.LOC104820869' => 'tha', 'THA.LOC104826241' => 'tha', 'Thecc.01G167900' => 'tca', 'Thecc.01G168000' => 'tca', 'Thecc.01G295300' => 'tca', 'Thecc.01G295400' => 'tca', 'Thecc.01G295500' => 'tca', 'Thecc.01G295600' => 'tca', 'Thecc.01G295700' => 'tca', 'Thecc.04G058800' => 'tca', 'Thecc.04G283300' => 'tca', 'Thecc.08G053100' => 'tca', 'Thhalv10001585m.g' => 'esa', 'Thhalv10006426m.g' => 'esa', 'Thhalv10008570m.g' => 'esa', 'Thhalv10008776m.g' => 'esa', 'Thhalv10009609m.g' => 'esa', 'Thhalv10011727m.g' => 'esa', 'Thhalv10012273m.g' => 'esa', 'Thhalv10014654m.g' => 'esa', 'Thhalv10017227m.g' => 'esa', 'Thhalv10017228m.g' => 'esa', 'Thhalv10021507m.g' => 'esa', 'Thhalv10028957m.g' => 'esa', 'TPR.G15236' => 'tpr', 'TPR.G18432' => 'tpr', 'TPR.G18435' => 'tpr', 'TPR.G25279' => 'tpr', 'TPR.G26413' => 'tpr', 'TPR.G26664' => 'tpr', 'TPR.G33987' => 'tpr', 'TPR.G33991' => 'tpr', 'TPR.G33998' => 'tpr', 'TWI14G0155' => 'twi', 'TWI36G0645' => 'twi', 'TWI59G0091' => 'twi', 'TWI59G0094' => 'twi', 'TWI59G0510' => 'twi', 'TWI59G0595' => 'twi', 'TWI59G1379' => 'twi', 'TWI59G1383' => 'twi', 'TWI74G0033' => 'twi', 'unitig_22.g5243' => 'ugi', 'unitig_32.g10730' => 'ugi', 'unitig_32.g10731' => 'ugi', 'unitig_8.g3713' => 'ugi', 'unitig_8.g3714' => 'ugi', 'vmacro02473' => 'vma', 'vmacro02474' => 'vma', 'vmacro02475' => 'vma', 'vmacro02476' => 'vma', 'vmacro04383' => 'vma', 'vmacro08739' => 'vma', 'vmacro18506' => 'vma', 'VMungo0331G1078' => 'vmu', 'VMungo0540G0034' => 'vmu', 'VMungo0540G2196' => 'vmu', 'VMungo0647G1141' => 'vmu', 'VMungo0647G2554' => 'vmu', 'VMungo0720G1241' => 'vmu', 'Zm00001eb002780' => 'zma', 'Zm00001eb002790' => 'zma', 'Zm00001eb002800' => 'zma', 'Zm00001eb002810' => 'zma', 'Zm00001eb022480' => 'zma', 'Zm00001eb022490' => 'zma', 'Zm00001eb022540' => 'zma', 'Zm00001eb022550' => 'zma', 'Zm00001eb022570' => 'zma', 'Zm00001eb051850' => 'zma', 'Zm00001eb142220' => 'zma', 'Zm00001eb152160' => 'zma', 'Zm00001eb321220' => 'zma', 'Zm00001eb354260' => 'zma', 'Zm00001eb370330' => 'zma', 'Zm00001eb402630' => 'zma', 'Zm00001eb402640' => 'zma', 'Zm00001eb418060' => 'zma' ) $gf_id = 'HOM05D000498' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000498' ) $data_identifier = 'HOM05D000498' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 45, 'aar' => (int) 10, 'aag' => (int) 11, 'ach' => (int) 5, 'amhyb' => (int) 7, 'aly' => (int) 13, 'aox' => (int) 24, 'arhy' => (int) 14, 'ath' => (int) 13, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 24, 'bca' => (int) 46, 'bol' => (int) 21, 'bra' => (int) 22, 'can' => (int) 4, 'cansat' => (int) 10, 'chi' => (int) 9, 'cru' => (int) 12, 'car' => (int) 7, 'cbr' => (int) 3, 'ccan' => (int) 3, 'cde' => (int) 6, 'cfa' => (int) 11, 'ccl' => (int) 8, 'cil' => (int) 10, 'cla' => (int) 4, 'col' => (int) 7, 'cpa' => (int) 5, 'cre' => (int) 3, 'csa' => (int) 4, 'camsi' => (int) 17, 'dca' => (int) 2, 'din' => (int) 6, 'dzi' => (int) 10, 'eca' => (int) 4, 'bvu' => (int) 8, 'egr' => (int) 23, 'fan' => (int) 19, 'fve' => (int) 6, 'gma' => (int) 12, 'ghi' => (int) 21, 'gra' => (int) 14, 'vvi' => (int) 11, 'han' => (int) 13, 'cav' => (int) 8, 'hma' => (int) 7, 'vpl' => (int) 9, 'sun' => (int) 5, 'lal' => (int) 10, 'lonja' => (int) 9, 'lja' => (int) 10, 'lsa' => (int) 5, 'mes' => (int) 8, 'mpo' => (int) 15, 'mbi' => (int) 12, 'mdo' => (int) 17, 'mtr' => (int) 11, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 6, 'nta' => (int) 10, 'nnu' => (int) 9, 'oeu' => (int) 11, 'osa' => (int) 19, 'pax' => (int) 7, 'pgr' => (int) 11, 'stu' => (int) 4, 'pvu' => (int) 12, 'ptr' => (int) 8, 'ppa' => (int) 11, 'pco' => (int) 1, 'ppe' => (int) 9, 'psa' => (int) 7, 'pso' => (int) 32, 'qlo' => (int) 19, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 6, 'sed' => (int) 6, 'sgi' => (int) 37, 'sas' => (int) 7, 'smo' => (int) 1, 'sly' => (int) 5, 'spe' => (int) 4, 'spa' => (int) 12, 'tar' => (int) 9, 'tha' => (int) 12, 'tca' => (int) 10, 'esa' => (int) 12, 'tpr' => (int) 9, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 7, 'vmu' => (int) 6, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb418060' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1